From c90b48e3f8da9dd0f8d2ae82ddf977436bb0cfc3 Mon Sep 17 00:00:00 2001
From: YurenHao0426 <blackhao0426@gmail.com>
Date: Sun, 15 Feb 2026 18:19:50 +0000
Subject: Initial implementation of HAG (Hopfield-Augmented Generation)

Core Hopfield retrieval module with energy-based convergence guarantees,
memory bank, FAISS baseline retriever, evaluation metrics, and end-to-end
pipeline. All 45 tests passing on CPU with synthetic data.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
---
 scripts/analyze_energy.py | 78 +++++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 78 insertions(+)
 create mode 100644 scripts/analyze_energy.py

(limited to 'scripts/analyze_energy.py')

diff --git a/scripts/analyze_energy.py b/scripts/analyze_energy.py
new file mode 100644
index 0000000..fd044a4
--- /dev/null
+++ b/scripts/analyze_energy.py
@@ -0,0 +1,78 @@
+"""Analyze energy curves and convergence properties of Hopfield retrieval.
+
+Usage:
+    python scripts/analyze_energy.py --config configs/default.yaml --memory-bank data/memory_bank.pt --questions data/questions.jsonl --output energy_analysis.json
+"""
+
+import argparse
+import json
+import logging
+
+import torch
+import yaml
+
+from hag.config import EncoderConfig, HopfieldConfig, MemoryBankConfig
+from hag.encoder import Encoder
+from hag.energy import (
+    compute_attention_entropy,
+    compute_energy_curve,
+    compute_energy_gap,
+    verify_monotonic_decrease,
+)
+from hag.hopfield import HopfieldRetrieval
+from hag.memory_bank import MemoryBank
+
+logging.basicConfig(level=logging.INFO)
+logger = logging.getLogger(__name__)
+
+
+def main() -> None:
+    parser = argparse.ArgumentParser(description="Analyze Hopfield energy curves")
+    parser.add_argument("--config", type=str, default="configs/default.yaml")
+    parser.add_argument("--memory-bank", type=str, required=True)
+    parser.add_argument("--questions", type=str, required=True)
+    parser.add_argument("--output", type=str, default="energy_analysis.json")
+    args = parser.parse_args()
+
+    with open(args.config) as f:
+        cfg = yaml.safe_load(f)
+
+    hopfield_config = HopfieldConfig(**cfg.get("hopfield", {}))
+    memory_config = MemoryBankConfig(**cfg.get("memory", {}))
+    encoder_config = EncoderConfig(**cfg.get("encoder", {}))
+
+    # Load memory bank
+    mb = MemoryBank(memory_config)
+    mb.load(args.memory_bank)
+
+    # Load questions
+    with open(args.questions) as f:
+        questions = [json.loads(line)["question"] for line in f]
+
+    encoder = Encoder(encoder_config)
+    hopfield = HopfieldRetrieval(hopfield_config)
+
+    analyses = []
+    for q in questions:
+        query_emb = encoder.encode(q)  # (1, d)
+        result = hopfield.retrieve(
+            query_emb, mb.embeddings, return_energy=True, return_trajectory=True
+        )
+
+        curve = compute_energy_curve(result)
+        analyses.append({
+            "question": q,
+            "energy_curve": curve,
+            "energy_gap": compute_energy_gap(curve),
+            "monotonic": verify_monotonic_decrease(curve),
+            "num_steps": result.num_steps,
+            "attention_entropy": compute_attention_entropy(result.attention_weights),
+        })
+
+    with open(args.output, "w") as f:
+        json.dump(analyses, f, indent=2)
+    logger.info("Energy analysis saved to %s (%d questions)", args.output, len(analyses))
+
+
+if __name__ == "__main__":
+    main()
-- 
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