From 8f63cf9f41bbdb8d55cd4679872d2b4ae2129324 Mon Sep 17 00:00:00 2001
From: YurenHao0426 <blackhao0426@gmail.com>
Date: Tue, 24 Feb 2026 08:40:49 +0000
Subject: EC-SBM community detection analysis: full pipeline and writeup

Implement community detection on 3 EC-SBM networks (polblogs, topology,
internet_as) using 5 methods (Leiden-Mod, Leiden-CPM at 0.1 and 0.01,
Infomap, graph-tool SBM). Compute AMI/ARI/NMI accuracy, cluster statistics,
and generate figures and LaTeX report.
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 writeup/references.bib | 102 +++++++++++++++++++++++++++++++++++++++++++++++++
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+@article{park2024wellconnectedness,
+  title={Well-connectedness and community detection},
+  author={Park, Minhyuk and Tabatabaee, Yasamin and Ramavarapu, Vikram and Liu, Baqiao and Pailodi, Vidya and Korobskiy, Dmitriy and Ayati, Mitra and Ramachandran, Tandy Warnow and Chacko, George},
+  journal={PLOS Complex Systems},
+  year={2024},
+  doi={10.1371/journal.pcsy.0000009}
+}
+
+@article{vule2025sbm,
+  title={Using Stochastic Block Models for Community Detection},
+  author={Vu-Le, The-Anh and Park, Minhyuk and Warnow, Tandy},
+  journal={Applied Network Science},
+  volume={11},
+  number={2},
+  year={2025},
+  doi={10.1007/s41109-025-00747-2}
+}
+
+@article{traag2019leiden,
+  title={From Louvain to Leiden: guaranteeing well-connected communities},
+  author={Traag, Vincent A and Waltman, Ludo and {van Eck}, Nees Jan},
+  journal={Scientific Reports},
+  volume={9},
+  number={1},
+  pages={5233},
+  year={2019},
+  doi={10.1038/s41598-019-41695-z}
+}
+
+@article{rosvall2008maps,
+  title={Maps of random walks on complex networks reveal community structure},
+  author={Rosvall, Martin and Bergstrom, Carl T},
+  journal={Proceedings of the National Academy of Sciences},
+  volume={105},
+  number={4},
+  pages={1118--1123},
+  year={2008},
+  doi={10.1073/pnas.0706851105}
+}
+
+@article{peixoto2014efficient,
+  title={Efficient Monte Carlo and greedy heuristic for the inference of stochastic block models},
+  author={Peixoto, Tiago P},
+  journal={Physical Review E},
+  volume={89},
+  number={1},
+  pages={012804},
+  year={2014},
+  doi={10.1103/PhysRevE.89.012804}
+}
+
+@article{holland1983sbm,
+  title={Stochastic blockmodels: First steps},
+  author={Holland, Paul W and Laskey, Kathryn Blackmond and Leinhardt, Samuel},
+  journal={Social Networks},
+  volume={5},
+  number={2},
+  pages={109--137},
+  year={1983},
+  doi={10.1016/0378-8733(83)90021-7}
+}
+
+@article{vinh2010ami,
+  title={Information theoretic measures for clusterings comparison: Variants, properties, normalization and correction for chance},
+  author={Vinh, Nguyen Xuan and Epps, Julien and Bailey, James},
+  journal={Journal of Machine Learning Research},
+  volume={11},
+  pages={2837--2854},
+  year={2010}
+}
+
+@article{hubert1985ari,
+  title={Comparing partitions},
+  author={Hubert, Lawrence and Arabie, Phipps},
+  journal={Journal of Classification},
+  volume={2},
+  pages={193--218},
+  year={1985},
+  doi={10.1007/BF01908075}
+}
+
+@article{traag2019cpm,
+  title={Detecting communities using asymptotical surprise},
+  author={Traag, Vincent A and Aldecoa, Rodrigo and Delvenne, Jean-Charles},
+  journal={Physical Review E},
+  volume={92},
+  number={2},
+  pages={022816},
+  year={2015},
+  doi={10.1103/PhysRevE.92.022816}
+}
+
+@article{newman2004modularity,
+  title={Finding and evaluating community structure in networks},
+  author={Newman, Mark EJ and Girvan, Michelle},
+  journal={Physical Review E},
+  volume={69},
+  number={2},
+  pages={026113},
+  year={2004},
+  doi={10.1103/PhysRevE.69.026113}
+}
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