Add collaborativeagents module and update gitignore

- Add collaborativeagents subproject with adapters, agents, and evaluation modules
- Update .gitignore to exclude large binary files (.whl, .tar), wandb logs, and results

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>

1 files changed, 59 insertions, 0 deletions

diff --git a/collaborativeagents/slurm/run_experiments_collab_baselines.sh b/collaborativeagents/slurm/run_experiments_collab_baselines.sh
new file mode 100755
index 0000000..bbf53fc
--- /dev/null
+++ b/collaborativeagents/slurm/run_experiments_collab_baselines.sh
@@ -0,0 +1,59 @@
+#!/bin/bash
+#SBATCH --job-name=run_collab_baselines
+#SBATCH --account=bfqt-delta-gpu
+#SBATCH --partition=gpuA100x4
+#SBATCH --nodes=1
+#SBATCH --ntasks=1
+#SBATCH --cpus-per-task=16
+#SBATCH --gres=gpu:nvidia_a100:4
+#SBATCH --mem=200G
+#SBATCH --time=48:00:00
+#SBATCH --output=logs/run_collab_baselines_%j.out
+#SBATCH --error=logs/run_collab_baselines_%j.err
+
+# Run CollaborativeAgents baselines on 4x A100 80GB
+# - contextual: Full history in context (summarize on overflow)
+# - reflection: CollaborativeAgents' agent_notes approach
+# - reflection_grpo: Reflection + GRPO training (with_proper_scaffolding)
+
+set -e
+
+cd /projects/bfqt/users/yurenh2/ml-projects/personalization-user-model
+
+# Create logs and results directories
+mkdir -p collaborativeagents/slurm/logs
+mkdir -p collaborativeagents/results
+
+echo "Starting CollaborativeAgents baselines at $(date)"
+echo "Job ID: $SLURM_JOB_ID"
+echo "Node: $SLURMD_NODENAME"
+echo "GPUs: $CUDA_VISIBLE_DEVICES"
+
+# Activate environment
+source /u/yurenh2/miniforge3/etc/profile.d/conda.sh
+conda activate eval
+
+# Check GPU availability
+nvidia-smi
+
+# Redirect HF cache to project space (avoid home quota issues)
+export HF_HOME=/projects/bfqt/users/yurenh2/.cache/huggingface
+mkdir -p $HF_HOME
+
+# Add project to path
+export PYTHONPATH="${PWD}/src:${PWD}/collaborativeagents:${PYTHONPATH}"
+
+# Run experiments
+cd collaborativeagents/scripts
+
+# Run the 3 CollaborativeAgents baselines
+echo "Running contextual, reflection, reflection_grpo baselines..."
+python run_experiments.py \
+    --methods contextual,reflection,reflection_grpo \
+    --datasets math-500 \
+    --n-profiles 20 \
+    --n-sessions 5 \
+    --profile-path ../data/complex_profiles_v2/profiles_100.jsonl \
+    --output-dir ../results/collab_baselines_$(date +%Y%m%d_%H%M%S)
+
+echo "CollaborativeAgents baselines completed at $(date)"